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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015947690.1_cds_XP_016489257.1_79799
CDS Infomation

[gene=LOC107809178] [db_xref=GeneID:107809178] [protein=probable beta-1,4-xylosyltransferase IRX10] [protein_id=XP_016489257.1] [location=join(23777..23891,23980..24368,24435..24676,24760..25273)] [gbkey=CDS]
Sequence

ATGCCAAATCTAGCATTTACGATGATTAGTTGGGTGTTTCTGCTGCTGCTACCTATCACC
ATTGCTGTAGGAAAGCTTCCTCAGGCAGCTCCTATTACTAGCGAGAGGATTTCTGGAAGT
GCTGGCGATGTCCTTGAAGATGACCCAGTAGGAAGATTGAAAGTTTACGTATACGAACTT
CCAAGCAAATATAACAAAAAGCTGTTGCAAAAAGACCCGAGATGTCTCACTCATATGTTT
GCTGCTGAAATCTTCATGCATCGATTCCTTTTATCAAGTGCCGTTAGAACTCTTAATCCT
GAAGAAGCTGATTGGTTTTATACCCCTGTGTACCCTACTTGTGACCTAACACCTAATGGG
TTGCCTTTGCCCTTCAAATCTCCGCGGATCATGAGGAGTGCAATACAACTTATCTCTGCA
AATTGGCCTTATTGGAATCGAACAGAAGGAGCTGATCACTTTTTTCTTGTTCCTCATGAT
TTTGGAGCTTGTTTTCATTATCAAGAAGAGAAAGCTATTGAACGAGGCATTCTTCCATTG
CTACAACGTGCTACCTTAGTCCAAACTTTTGGACAGCGGAACCATGTATGTTTGAATGAG
GGCTCAATCACAATACCACCATATGCACCCCCTCAGAAGATGCAGGCTCATTTGATTCCC
CCAGACACTCCCAGGTCCATCTTTGTCTATTTTCGTGGTTTGTTTTATGATGTCAACAAT
GATCCTGAAGGTGGTTATTATGCAAGAGGTGCAAGGGCATCAATTTGGGAGAATTTCAAG
AACAATCCACTGTTTGACATCTCGACTGACCACCCAACCACATATTACGAGGACATGCAA
CGAGCCATTTTCTGCTTATGCCCTTTGGGTTGGGCTCCATGGAGTCCTAGATTAGTAGAA
AGTGTAGTATTTGGTTGCATACCTGTTATTATAGCCGATGACATTGTTTTGCCTTTTGCT
GATGCTATCCCTTGGGAAGATATTGGTGTGTTTGTAGCAGAAAAAGATGTACCTTACTTA
GATACTATTCTCACTTCTATACCACCACATGTTGTCCTAAGAAAGCAAAGGTTTCTAGCC
AATCCATCAATGAAGAAGGCAATGTTGTTCCCACAACCAGCCCAACCTAGAGATGCATTT
CATCAAATCTTAAATGGGCTTGCTCGGAAATTGCCTCATCAAAAGACTACCTATCTGAAG
CCAGGAGAAAAGATACTCAACTGGACAGCAGGTCCAACTGGAGACTTGAAACCTTGGTAA

Peptide Sequence

PEP ID

XP_016489257.1
PEP Infomation

PREDICTED: probable beta-1,4-xylosyltransferase IRX10 [Nicotiana tabacum]
Sequence

MPNLAFTMISWVFLLLLPITIAVGKLPQAAPITSERISGSAGDVLEDDPVGRLKVYVYEL
PSKYNKKLLQKDPRCLTHMFAAEIFMHRFLLSSAVRTLNPEEADWFYTPVYPTCDLTPNG
LPLPFKSPRIMRSAIQLISANWPYWNRTEGADHFFLVPHDFGACFHYQEEKAIERGILPL
LQRATLVQTFGQRNHVCLNEGSITIPPYAPPQKMQAHLIPPDTPRSIFVYFRGLFYDVNN
DPEGGYYARGARASIWENFKNNPLFDISTDHPTTYYEDMQRAIFCLCPLGWAPWSPRLVE
SVVFGCIPVIIADDIVLPFADAIPWEDIGVFVAEKDVPYLDTILTSIPPHVVLRKQRFLA
NPSMKKAMLFPQPAQPRDAFHQILNGLARKLPHQKTTYLKPGEKILNWTAGPTGDLKPW

Transcript Sequence

Gene sequence data has not been registered.